Hierarchy For All Packages

Package Hierarchies:

fungus, fungus.core, fungus.core.agent, fungus.core.canal, fungus.core.infrastructure, fungus.core.remoteControl, fungus.core.scheduler, fungus.core.service, fungus.core.utils, fungus.core.utils.classLoader, fungus.core.utils.hash, fungus.curses, fungus.dx, fungus.dx.module, fungus.dx.netcdf, fungus.gui, fungus.gui.module, fungus.gui.module.visualisation, fungus.gui.myceliumgraph, fungus.gui.myceliumgraph.graphicNode, fungus.gui.myceliumgraph.modelNode, fungus.heatbugs, fungus.mycelium, fungus.mycelium.procedures, fungus.mycelium.xml, fungus.mycelium.xml.processing, fungus.particules, fungus.plot, fungus.slimemold, fungus.space, fungus.visualisation, gov.sandia.postscript

Class Hierarchy

• class java.lang.Object
  • class javax.swing.AbstractAction (implements javax.swing.Action, java.lang.Cloneable, java.io.Serializable)
    • class fungus.gui.myceliumgraph.MyceliumGraph.AddLinkAction
    • class fungus.gui.myceliumgraph.MyceliumGraph.AddNodeAction
    • class fungus.gui.myceliumgraph.MyceliumGraph.NewAction
  • class fungus.core.canal.AbstractCanal (implements fungus.core.canal.Canal)
    • class fungus.core.canal.CanalLocal
    • class fungus.core.canal.CanalNet (implements fungus.core.infrastructure.NetMessageListener)
  • class java.util.AbstractCollection (implements java.util.Collection)
    • class java.util.AbstractList (implements java.util.List)
      • class java.util.ArrayList (implements java.lang.Cloneable, java.util.List, java.io.Serializable)
        • class fungus.core.utils.CircularList
  • class javax.swing.text.AbstractDocument (implements javax.swing.text.Document, java.io.Serializable)
    • class javax.swing.text.DefaultStyledDocument (implements javax.swing.text.StyledDocument)
      • class fungus.gui.VTDocument
  • class java.util.AbstractMap (implements java.util.Map)
    • class java.util.HashMap (implements java.lang.Cloneable, java.util.Map, java.io.Serializable)
      • class fungus.gui.SharingSpace
  • class fungus.mycelium.xml.processing.AbstractNodeProcessor (implements fungus.mycelium.xml.processing.NodeProcessor)
    • class fungus.mycelium.xml.processing.Agent
    • class fungus.mycelium.xml.processing.AgentClass
    • class fungus.mycelium.xml.processing.Behavior
    • class fungus.mycelium.xml.processing.Case
    • class fungus.mycelium.xml.processing.Definition
    • class fungus.mycelium.xml.processing.If
    • class fungus.mycelium.xml.processing.Initialisation
    • class fungus.mycelium.xml.processing.Message
    • class fungus.mycelium.xml.processing.Method
    • class fungus.mycelium.xml.processing.Mycelium
    • class fungus.mycelium.xml.processing.Parameter
    • class fungus.mycelium.xml.processing.Repeat
    • class fungus.mycelium.xml.processing.Resource
    • class fungus.mycelium.xml.processing.Scheme
    • class fungus.mycelium.xml.processing.Simulation
    • class fungus.mycelium.xml.processing.Switch
    • class fungus.mycelium.xml.processing.Variable
    • class fungus.mycelium.xml.processing.Visualize
  • class fungus.core.service.AbstractService (implements fungus.core.service.Service, fungus.core.service.ServiceInformation)
    • class fungus.core.service.CreateAgent (implements fungus.core.service.AgentInstanceMaker, fungus.core.service.CreateAgentService)
    • class fungus.core.service.DummyNetwork (implements fungus.core.service.NetworkService)
    • class fungus.core.service.Info (implements fungus.core.service.InfoService)
    • class fungus.core.service.LoadBalancer (implements fungus.core.service.LoadBalancerService)
    • class fungus.core.service.Monitor (implements fungus.core.service.MonitorService)
    • class fungus.mycelium.MyceliumRealService (implements fungus.mycelium.MyceliumService)
    • class fungus.core.infrastructure.Network (implements fungus.core.service.NetworkService, java.lang.Runnable)
    • class fungus.core.service.NetworkCreateAgent (implements fungus.core.service.AgentInstanceMaker, fungus.core.service.CreateAgentService)
    • class fungus.core.remoteControl.RemoteControl (implements fungus.core.service.RemoteControlService)
    • class fungus.core.scheduler.Scheduler (implements java.lang.Runnable, fungus.core.service.SchedulerService)
      • class fungus.core.scheduler.MonitoredScheduler (implements fungus.core.service.SchedulerService)
    • class fungus.core.infrastructure.Synchronization (implements fungus.core.service.SynchronizationService)
    • class fungus.core.service.Test (implements fungus.core.service.TestService)
    • class fungus.visualisation.Visualisation (implements fungus.core.service.VisualisationService)
  • class fungus.core.canal.AccessibleMessage (implements fungus.core.canal.Message)
    • class fungus.core.canal.NotifyMessage
  • class fungus.core.agent.Agent (implements java.lang.Runnable)
    • class fungus.core.agent.AccessibleAgent (implements fungus.core.canal.MessageListener)
      • class fungus.core.agent.NotifyAgent (implements fungus.core.canal.MessageListener)
        • class fungus.mycelium.MyceliumAgent (implements fungus.core.canal.MessageListener)
        • class fungus.plot.Plotter
      • class fungus.particules.Particule (implements fungus.core.canal.MessageListener)
    • class fungus.core.agent.AgentsGroup (implements fungus.core.canal.MessageListener)
      • class fungus.space.Space
        • class fungus.space.LayeredSpace
          • class fungus.space.TwoDimensionLayeredSpace
            • class fungus.heatbugs.HeatBugSpace (implements fungus.visualisation.Collectable)
            • class fungus.slimemold.Space (implements fungus.visualisation.Collectable)
        • class fungus.space.OneDim
        • class fungus.space.SpaceContainer
        • class fungus.space.TwoDimensionSpace
          • class fungus.particules.Space (implements fungus.visualisation.Collectable)
    • class fungus.heatbugs.Bug (implements fungus.core.canal.MessageListener)
    • class fungus.slimemold.Dictyostelium (implements fungus.core.canal.MessageListener)
    • class fungus.core.agent.EmptyAgent
    • class fungus.space.Time
  • class fungus.core.agent.AgentID (implements java.io.Serializable)
  • class fungus.core.utils.hash.AgentIDHashCodeSet
  • class fungus.core.utils.hash.AgentIDMap (implements java.util.Map)
  • class fungus.mycelium.AgentMaker (implements fungus.core.service.AgentInstanceMaker)
  • class fungus.core.agent.AgentsGroupMessage (implements fungus.core.canal.Message)
    • class fungus.space.SpaceMessage
      • class fungus.space.LayeredSpaceMessage
      • class fungus.particules.PSpaceMessage
      • class fungus.space.SpaceContainerMessage
  • class fungus.gui.module.AgentsMonitorModule (implements fungus.gui.Module)
  • class fungus.gui.myceliumgraph.BasicLink (implements fungus.gui.myceliumgraph.LinkElement)
  • class fungus.space.BSPBoundary (implements fungus.space.Boundary)
  • class fungus.space.CircularStructure (implements fungus.space.Structure)
  • class fungus.core.utils.classLoader.ClassFinder
    • class fungus.core.utils.classLoader.AgentFinder
    • class fungus.core.utils.classLoader.ServiceFinder
  • class java.lang.ClassLoader
    • class fungus.core.utils.classLoader.FileClassLoader
  • class fungus.plot.Collector
  • class fungus.gui.module.CommandModule (implements fungus.gui.Module)
  • class java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
    • class java.awt.Canvas (implements javax.accessibility.Accessible)
      • class fungus.plot.Ruler
    • class java.awt.Container
      • class javax.swing.JComponent (implements java.io.Serializable)
        • class fungus.gui.myceliumgraph.graphicNode.BasicNode (implements fungus.gui.myceliumgraph.ElementView)
          • class fungus.gui.myceliumgraph.graphicNode.AgentNode
          • class fungus.gui.myceliumgraph.graphicNode.SimulationNode
        • class javax.swing.JFileChooser (implements javax.accessibility.Accessible)
          • class fungus.gui.module.visualisation.PlotFileChooser
          • class fungus.gui.SaveAllStateFileChooser
        • class javax.swing.JInternalFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
          • class fungus.gui.myceliumgraph.graphicNode.DocumentationIFrame
          • class fungus.gui.myceliumgraph.GraphIFrame
          • class fungus.gui.myceliumgraph.graphicNode.ParameterIFrame
        • class javax.swing.JPanel (implements javax.accessibility.Accessible)
          • class fungus.gui.module.AgentsMonitorPanel
          • class fungus.gui.module.CommandModuleParamCollector (implements fungus.core.utils.ParametersCollectorInterface)
          • class fungus.gui.module.CommandPanel
          • class fungus.gui.module.CommandPreferencePanel
          • class fungus.dx.module.DxStreamPanel
          • class fungus.dx.module.DxVisualistionPanel
          • class fungus.visualisation.FileSpace2D (implements fungus.visualisation.DataCollector, java.lang.Runnable)
          • class fungus.gui.module.FungusConf
          • class fungus.gui.myceliumgraph.GraphPanel (implements java.awt.print.Printable, fungus.gui.myceliumgraph.View)
          • class fungus.gui.module.visualisation.IntPlotPanel
          • class fungus.gui.module.MyceliumViewPanel
          • class fungus.gui.myceliumgraph.graphicNode.ParameterIFrame.Field
          • class fungus.gui.module.visualisation.PlotPanel (implements fungus.visualisation.DataCollector)
          • class fungus.gui.module.PropertiesEditor
          • class fungus.gui.module.TestPanel
          • class fungus.gui.module.TestPreferencePanel
          • class fungus.gui.module.VisualisationPanel
          • class fungus.gui.module.VisualisationPreferences
        • class javax.swing.JScrollPane (implements javax.accessibility.Accessible, javax.swing.ScrollPaneConstants)
          • class fungus.gui.module.visualisation.Space2D (implements fungus.visualisation.DataCollector, java.lang.Runnable)
        • class fungus.gui.module.visualisation.Rule
      • class java.awt.Panel (implements javax.accessibility.Accessible)
        • class fungus.dx.DxDataCollector (implements fungus.visualisation.DataCollector, java.lang.Runnable)
      • class java.awt.Window (implements javax.accessibility.Accessible)
        • class java.awt.Dialog
          • class javax.swing.JDialog (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • class fungus.gui.About
            • class fungus.gui.ExceptionPanel
        • class java.awt.Frame (implements java.awt.MenuContainer)
          • class fungus.visualisation.AWTVisualisationContainer (implements fungus.visualisation.VisualisationContainer)
          • class javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • class fungus.gui.Fungus
            • class fungus.gui.Help
            • class fungus.gui.MainFrame
            • class fungus.gui.myceliumgraph.MyceliumGraph
            • class fungus.gui.Preferences
          • class fungus.core.utils.ParametersCollectorAWT (implements java.awt.event.ActionListener, fungus.core.utils.ParametersCollectorInterface)
        • class javax.swing.JWindow (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer)
          • class fungus.gui.Splash
    • class java.awt.Label (implements javax.accessibility.Accessible)
      • class fungus.visualisation.NullVisualisation (implements fungus.visualisation.DataCollector)
  • class charva.awt.Component
    • class charva.awt.Container
      • class charva.awt.Window (implements java.lang.Runnable)
        • class charva.awt.Frame
          • class charvax.swing.JFrame
            • class fungus.curses.ParametersCollectorCurses (implements charva.awt.event.ActionListener, fungus.core.utils.ParametersCollectorInterface)
  • class java.util.Date (implements java.lang.Cloneable, java.lang.Comparable, java.io.Serializable)
    • class fungus.core.scheduler.Time
  • class fungus.dx.Dx
  • class fungus.dx.module.DxVisualistionModule (implements fungus.gui.Module)
  • class fungus.space.EuclidianStructure (implements fungus.space.Structure)
  • class fungus.core.scheduler.EventDrivenModel (implements fungus.core.scheduler.TimeModel)
  • class fungus.core.ExceptionManager (implements fungus.core.ExceptionManagerInterface)
  • class fungus.gui.ExceptionManager (implements fungus.core.ExceptionManagerInterface)
  • class fungus.F
  • class fungus.FigTest
  • class fungus.Fungus
  • class fungus.gui.module.FungusConfModule (implements fungus.gui.Module)
  • class java.awt.Graphics
    • class fungus.core.utils.FigGraphics
    • class gov.sandia.postscript.PSGrBase
      • class gov.sandia.postscript.PSGraphics
  • class fungus.gui.myceliumgraph.modelNode.GraphModel (implements fungus.gui.myceliumgraph.Model)
  • class fungus.gui.IconManager
  • class fungus.core.infrastructure.InfrastructureFactory
  • class fungus.core.infrastructure.InfrastructureImpl (implements fungus.core.infrastructure.Infrastructure, fungus.core.infrastructure.NetMessageListener)
  • class fungus.core.utils.IntAccumulator
  • class gnu.expr.Interpreter
    • class gnu.kawa.lispexpr.LispInterpreter
      • class kawa.standard.Scheme
        • class fungus.mycelium.procedures.SchemeSession
  • class fungus.gui.module.JaxeModule (implements fungus.gui.Module)
  • class fungus.gui.myceliumgraph.graphicNode.Link
  • class fungus.core.canal.MessageEvent
  • class fungus.core.canal.MessageEventPool
  • class fungus.core.canal.MessagePool
  • class fungus.gui.myceliumgraph.modelNode.ModelElementFactory
  • class fungus.gui.ModuleManager
  • class fungus.gui.myceliumgraph.MTree (implements fungus.gui.myceliumgraph.Controller, javax.swing.tree.TreeModel)
  • class fungus.gui.myceliumgraph.MyceliumStrategy (implements fungus.gui.myceliumgraph.LoadSaveStrategy)
  • class fungus.gui.module.MyceliumViewModule (implements fungus.gui.Module)
  • class fungus.gui.module.MyceliumViewTreeModel (implements javax.swing.tree.TreeModel)
  • class fungus.space.Neighborhood (implements java.io.Serializable)
  • class fungus.dx.netcdf.Netcdf
  • class fungus.core.infrastructure.NetMessageSelector
  • class fungus.gui.myceliumgraph.modelNode.Node (implements fungus.gui.myceliumgraph.ModelElement)
    • class fungus.gui.myceliumgraph.modelNode.AgentNode
    • class fungus.gui.myceliumgraph.modelNode.RootNode
    • class fungus.gui.myceliumgraph.modelNode.SimulationNode
  • class fungus.mycelium.xml.Node
  • class fungus.gui.myceliumgraph.NodeFactory
  • class fungus.visualisation.NullVisualisationFactory (implements fungus.visualisation.VisualisationFactory)
  • class fungus.core.utils.ObjectFactory
  • class fungus.core.utils.Pair
  • class fungus.gui.myceliumgraph.modelNode.Parameter
  • class fungus.core.utils.ParametersCollector
  • class fungus.core.utils.ParametersCollectorText (implements fungus.core.utils.ParametersCollectorInterface)
  • class gnu.xml.ParsedXMLHandler
    • class fungus.mycelium.xml.Handler
    • class fungus.gui.myceliumgraph.ModelXMLHandler
    • class fungus.gui.myceliumgraph.ViewXMLHandler
  • class fungus.space.Partition2D (implements fungus.space.Partition)
  • class fungus.plot.PlotOutput
  • class fungus.core.scheduler.Pool (implements fungus.core.scheduler.TimeModel)
    • class fungus.core.scheduler.TimeDrivenPool
  • class fungus.space.Position2D (implements fungus.space.Position, java.io.Serializable)
  • class gnu.mapping.Procedure (implements gnu.mapping.Named)
    • class gnu.mapping.Procedure2
      • class fungus.mycelium.procedures.Get
    • class gnu.mapping.Procedure3
      • class fungus.mycelium.procedures.SendTo
      • class fungus.mycelium.procedures.Set
  • class fungus.mycelium.xml.processing.ProcessStrategy
  • class fungus.PSTest
  • class fungus.core.remoteControl.RemoteClient
  • class fungus.core.remoteControl.RemoteServer
  • class fungus.core.scheduler.Scheduler.MessageListener (implements fungus.core.infrastructure.NetMessageListener)
  • class fungus.core.service.ServiceDump
  • class fungus.core.infrastructure.ServiceFactory
  • class fungus.gui.module.ServicesPropertiesEditorEntryView (implements fungus.gui.module.PropertiesEditorEntryView)
  • class fungus.core.infrastructure.SimulationAdapter (implements fungus.core.infrastructure.Simulation)
    • class fungus.Diff
    • class fungus.mycelium.Mycelium (implements fungus.core.infrastructure.Simulation)
    • class fungus.St
  • class fungus.gui.module.visualisation.Space2DVisualisationData
  • class kawa.lang.Syntax (implements gnu.mapping.Named, gnu.mapping.Printable)
    • class fungus.mycelium.procedures.Send
    • class kawa.standard.thisRef
      • class fungus.mycelium.procedures.Id
  • class fungus.mycelium.Test
  • class fungus.gui.module.TestModule (implements fungus.gui.Module)
  • class java.lang.Thread (implements java.lang.Runnable)
    • class fungus.core.infrastructure.NetConnection
    • class fungus.core.utils.Shell
  • class java.lang.Throwable (implements java.io.Serializable)
    • class java.lang.Exception
      • class fungus.core.FungusException
        • class fungus.core.canal.BadCanalException
        • class fungus.core.canal.BadMessageException
        • class fungus.core.infrastructure.CreateAgentException
          • class fungus.core.infrastructure.NetworkedCreationAgentException
        • class fungus.core.service.CreateAgentException
        • class fungus.core.canal.CreateCanalException
        • class fungus.core.infrastructure.FungusProtocolException
        • class fungus.mycelium.MyceliumException
          • class fungus.mycelium.MyceliumProcessingException
        • class fungus.core.agent.NullAgentException
        • class fungus.core.service.ServiceException
      • class java.lang.RuntimeException
        • class fungus.core.FungusRuntimeException
        • class fungus.core.MethodNotImplementedException
  • class fungus.core.scheduler.TimeDrivenModel (implements fungus.core.scheduler.TimeModel)
  • class gnu.trove.TIntHash
    • class gnu.trove.TIntObjectHashMap
      • class fungus.core.utils.hash.IntMap
  • class fungus.gui.myceliumgraph.TNode
  • class gnu.trove.TObjectHash
    • class gnu.trove.THashMap (implements java.util.Map)
      • class fungus.core.utils.hash.ObjectMap (implements java.io.Serializable, gnu.trove.TObjectObjectProcedure)
  • class fungus.space.TwoDimensionLayer (implements fungus.space.Layer)
    • class fungus.space.Diffusive2DLayer
  • class fungus.space.TwoDimensionLayerRequest (implements java.io.Serializable)
  • class fungus.core.utils.Util
  • class fungus.gui.myceliumgraph.graphicNode.ViewElementFactory
  • class fungus.visualisation.VisualisationManager
  • class fungus.gui.module.VisualisationModule (implements fungus.gui.Module, fungus.visualisation.VisualisationContainer, fungus.visualisation.VisualisationFactory)
  • class fungus.mycelium.XmlTest

Interface Hierarchy

• interface fungus.core.service.AgentInstanceMaker
• interface fungus.space.Boundary
• interface fungus.core.canal.Canal
• interface fungus.visualisation.Collectable
• interface fungus.gui.myceliumgraph.Controller
• interface fungus.visualisation.DataCollector
• interface java.util.EventListener
  • interface fungus.gui.myceliumgraph.ElementView
  • interface fungus.gui.myceliumgraph.View
• interface fungus.core.ExceptionManagerInterface
• interface fungus.space.Layer
• interface fungus.gui.myceliumgraph.LinkElement
• interface fungus.gui.myceliumgraph.LoadSaveStrategy
• interface fungus.core.canal.MessageHandler
• interface fungus.core.canal.MessageListener
• interface fungus.gui.myceliumgraph.Model
• interface fungus.gui.myceliumgraph.ModelElement
• interface fungus.gui.Module
• interface fungus.core.infrastructure.NetMessageListener
  • interface fungus.core.infrastructure.Infrastructure
    • interface fungus.core.infrastructure.InfrastructureProxy
• interface fungus.mycelium.xml.processing.NodeProcessor
• interface fungus.core.utils.ParametersCollectorInterface
• interface fungus.space.Partition
• interface fungus.gui.module.visualisation.PlotFileChooser.FileProperty
• interface fungus.space.Position
• interface fungus.gui.module.PropertiesEditorEntryView
• interface java.io.Serializable
  • interface fungus.core.canal.Message
• interface fungus.core.service.Service
  • interface fungus.core.service.CreateAgentService
  • interface fungus.core.service.InfoService
  • interface fungus.core.service.LoadBalancerService
  • interface fungus.core.service.MonitorService
  • interface fungus.mycelium.MyceliumService
  • interface fungus.core.service.NetworkService
  • interface fungus.core.service.RemoteControlService
  • interface fungus.core.service.SchedulerService
  • interface fungus.core.service.SynchronizationService
  • interface fungus.core.service.TestService
  • interface fungus.core.service.VisualisationService
• interface fungus.core.service.ServiceInformation
• interface fungus.core.infrastructure.Simulation
• interface fungus.core.infrastructure.SimulationInformation
• interface fungus.space.Structure
• interface fungus.core.scheduler.TimeModel
• interface gnu.trove.TObjectObjectProcedure
  • interface fungus.core.utils.hash.AgentIDTimeProcedure
• interface fungus.visualisation.VisualisationContainer
• interface fungus.visualisation.VisualisationFactory